Python bindings

Click on the links in the headings for more information.

Manually building h5py bindings with local version of hdf5

python setup.py build_ext --include-dirs=/hpc/psam012/usr/hdf5/hdf5-1.8.12/include/ --library-dirs=/hpc/psam012/usr/hdf5/hdf5-1.8.12/lib/
python setup.py install --home=/hpc/psam012/opt/summer-projects/2017/python-modules/

Alternative is to set the HDF5_DIR environmental variable

    export HDF5_DIR=/hpc/psam012/usr/hdf5/hdf5-1.8.12/

Then update your ~/.bashrc

    #export PYTHONPATH="/hpc/psam012/opt/summer-projects/2017/python-modules/lib/python:$PYTHONPATH"